YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|189346881, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSICIVNGLR NRHSNRSFFF SFLVLLLLAS CSGNAVPVPE VHHKEQKEKD MPYNQLTPEE  60
   61 ERVIVHKGTE PPFSGKYYLN REKGTYHCRQ CDAPLFSSAD KFESGTGWPS FDDALPGAVK 120
  121 EVRDADGRRT EIVCANCGAH LGHVFFNEGM TGKNVRHCVN SVSLNFQPEA QKPPATRTAV 180
  181 FAGGCFWGVE YHFSNVKGVL AVKSGYTGGE TSNPSYKQVC SGRTGHAEAV EVEYDPALVS 240
  241 YETLAKLFFE IHDPTQVNRQ GPDAGTQYRS AVFYADEEQR QVAARLIAEL KAKGYLVATT 300
  301 VEKAGTFWPA EDYHQDYYKK TGHQPYCHIY TKRF

Type	Start	End	Confidence
Signal Peptide	1	35	0.97
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	334	0.99