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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75241567
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGMGLVCSA LPALAMEAWN NQQGGNKYQV IFDGKIYENA WWVSSTNCPG KAKANDATNP  60
   61 WRLKRTATAA EISQFGNTLS CEKSGSSSSS NSNTPASNTP ANGGSATPAQ GTVPSNSSVV 120
  121 AWNKQQGGQT WYVVFNGAVY KNAWWVASSN CPGDAKGNDA SNPWRYVRAA TATEISETSN 180
  181 PQSCTSAPQP APDVKPAPDV KPAPDVQPAP ADKSNDNYAV VAWKGQEGSS TWYVIYNGGI 240
  241 YKNAWWVGAA NCPGDAKEND ASNPWRYVRA ATATEITQYG NPGSCSVKPD NNGGAVTPVD 300
  301 PTPETPETPV TPTPDNNEPS TPADSSNDYS LQAWSGQEGS EIYHVIFNGN VYQNAWWVGS 360
  361 EDCPRGTSVE NSNNPWRLVR TATAAEMSQY GNPTTCEIDN GGVIIANGFQ ASKAYSANSI 420
  421 VDYNDAHYKT SVDQDAWGFV PGGDNPWKKY EPAKAWSAST VYVKGDRVVV DGQAYEALFW 480
  481 TQSDNPALVA NQNATGSNSR PWKPLGKTQS YSNEELNNAP QFNPETLYAS DTLIRFNGEN 540
  541 YISQSKVQKV SPSDSNPWRV FVDWTGTKER VGTPKKAWPK HVYAPYVDFT LNTIPDLAAL 600
  601 AKNHNVNHFT LAFVVSKDAN TCLPTWGTAY GMQNYAQYSK IKALREAGGD VMLSIGGANN 660
  661 APLAASCKNV DDLMQHYYDI VDNLNLRVLD FDIEGTWVAD QASIERRNLA VKKVQDKWKS 720
  721 EGKDIAIWYT LPILPTGLTP EGMNVLSDAK AKGVELAGVN VMTMDYGNAI VNDG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle