YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110642699, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPVNKRVL KILFILFVVA FCVYLVPRVA INFFYYPDDK IYGPDPWSAE SIEFTAKDGT  60
   61 RLQGWFIPSS TGPADNAIST IIHAHGNAGN MSAHWPLVSW LPERNFNVFM FDYRGFGKSK 120
  121 GTPSQAGLLD DTQSAINVVR HRSDVNPQRL VLFGQSIGGA NILDVIGQGD REGIRAVILD 180
  181 STFASYATIA NQMLPGSGYL LDESYSGENY IASVSPIPLL LIHGKADHVI PWQHSEKLYS 240
  241 LAKEPKRLIL IPDGEHIDAF SDRHGDVYRE QMVDFILSAL NPQN

Type	Start	End	Confidence
Signal Peptide	1	30	0.51
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	284	0.92