YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75239619
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLFTDVTG TVPDAEEIAR KAELFRQQTG IAPFIVVVPS VNEASFRQNG KAMLAHAASS  60
   61 MSNVKGSVLL LFTTREPRLI MITNGQVESS MDDKHLGLLV ENHTLAYLHA DLWYQGINNA 120
  121 LAVLQAQILK QPTPPLTYYP HPGQQHENDP PGSTTTLGLF AWAVAFIVFA AFFNYTTRLY 180
  181 YALKFAVAMA VANMGYQALC LYIDNSFAIT RISPLWAGLI GVCTFIAALL WTSKR

Type	Start	End	Confidence
Non-Cytoplasmic	1	153	0.63
Transmembrane Helix	154	175	0.88
Cytoplasmic	176	180	0.64
Transmembrane Helix	181	203	0.82
Non-Cytoplasmic	204	211	0.65
Transmembrane Helix	212	232	0.93
Cytoplasmic	233	235	0.70