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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75239255
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMSVFQSFG PSESNGRKVD YSTFLQEVNN DQVREARING REINVTKKDS NRYTTYIPVQ  60
   61 DPKLLDNLLT KNVKVVGEPP EEPSLLASIF ISWFPMLLLI GVWIFFMRQM QGGGGKGAMS 120
  121 FGKSKARMLT EDQIKTTFAD VAGCDEAKEE VAELVEYLRE PSRFQKLGGK IPKGVLMVGP 180
  181 PGTGKTLLAK AIAGEAKVPF FTISGSDFVE MFVGVGASRV RDMFEQAKKA APCIIFIDEI 240
  241 DAVGRQRGAG LGGGHDEREQ TLNQMLVEMD GFEGNEGIIV IAATNRPDVL DPALLRPGRF 300
  301 DRQVVVGLPD VRGREQILKV HMRRVPLAPD IDAAIIARGT PGFSGADLAN LVNEAALFAA 360
  361 RGNKRVVSMV EFEKAKDKIM MGAERRSMVM TEAQKESTAY HEAGHAIIGR LVPEHDPVHK 420
  421 VTIIPRGRAL GVTFFLPEGD AISASRQKLE SQISTLYGGR LAEEIIYGPE HVSTGASNDI 480
  481 KVATNLARNM VTQWGFSEKL GPLLYAEEEG EVFLGRSVAK AKHMSDETAR IIDQEVKALI 540
  541 ERNYNRARQL LTDNMDILHA MKDALMKYET IDAPQIDDLM ARRDVRPPAG WEEPGASNNS 600
  601 GDNGSPKAPR PVDEPRTPNP GNTMSEQLGD K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle