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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75238134
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRFQKQKNPL PXKTEKCHNI GCLYSISGFL MALTAALKAQ IAAWYKALQE QIPDFIPRAP  60
   61 QRQMIADVAK TLAGEEGRHL AIEAPTGVGK TLSYLIPGIA IAREEQKTLV VSTANVALQD 120
  121 QIYSKDLPLL KKIIPDLKFT AAFGRGRYVC PRNLTALAST EPTQQDLLAF LDDELTPNNQ 180
  181 EEQKRCAKLK GDLDTYKWDG LRDHTDIAID DDLWRRLSTD KASCLNRNCY YYRECPFFVA 240
  241 RREIQEAEVV VANHALVMAA MESEAVLPDP KNLLLVLDEG HHLPDVARDA LEMSAEITAP 300
  301 WYRLQLDLFT KLVATCMEQF RPKTIPPLAI PERLNAHCEE LYELIASLNN ILNLYMPAGQ 360
  361 EAEHRFAMGE LPDEVLEICQ RLAKLTEMLR GLAELFLNDL SEKTGSHDIV RLHRLILQMN 420
  421 RALGMFEAQS KLWRLASLAQ SSGAPVTKWA TREEREGQLH LWFHCVGIRV SDQLERLLWR 480
  481 SIPHIIVTSA TLRSLNSFSR LQEMSGLKEK AGDRFVALDS PFNHCEQGKI VIPRMRVEPS 540
  541 IDNEEQHIAE MAAFFREQVE SKKHLGMLVL FASGRAMQRF LDYVTDLRLM LLVQGDQPRY 600
  601 RLVELHRKRV ANGERSVLVG LQSFAEGLDL KGDLLSQVHI HKIAFPPIDS PVVITEGEWL 660
  661 KSLNRYPFEV QSLPSASFNL IQQVGRLIRS HGCWGEVVIY DKRLLTKNYG KRLLDALPVF 720
  721 PIEQPEVPEG IVKKKEKTKS PRRRRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle