YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75189501
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSGCNSALL DPKGQIGLEQ RSLILTAFGL MLIVVIPAIL MAVGFAWKYR ASNKDAKYSP  60
   61 NWSHSNKVEA VVWTVPILII IFLAVLTWKT THALEPSKPL AHDEKPITIE VVSMDWKWFF 120
  121 IYPEQGIATV NEIAFPANTP VYFKVTSNSV MNSFFIPRLG SQIYAMAGMQ TRLHLIANEP 180
  181 GTYDGISASY SGPGFSGMKF KAIATPDRAE FDQWVAKAKQ SPNTMSDMAA FEKLAAPSEY 240
  241 NQVEYFSNVK PDLFADVINK FMAHGKSMDM TQPEGEHSAH EGMEGMDMSH AESAH

Type	Start	End	Confidence
Cytoplasmic	1	22	0.68
Transmembrane Helix	23	46	0.89
Non-Cytoplasmic	47	69	0.67
Transmembrane Helix	70	90	0.92
Cytoplasmic	91	295	0.70