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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75236627, gi|...
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNCWKILEI EETTDVDIIR RAYLALLPSF HPETDPQGFK QLRQAYEEAL RIAQSPAKSV  60
   61 WQPEEYEVAE HEILLAFRAL LASDSERFLP SAWQRFIQQL NYCSMEDIDE LRWSLCTIAM 120
  121 NTAHLSFECV VLLAERLRWL QEENVGEIDE EELESFLYAI AKGNVFNFQT ILHLPVAVQN 180
  181 DTIDFYQMFA RIWSSHPEWL TLYLAQHRAV IIPDDAKLHR NLLRWYSAGR LDIPELLDYA 240
  241 RSWREAEPDN EDARYYEYAQ RVYCGEGESL LAELCDYWRE YPSTQADALM LQWCRQHRVD 300
  301 YYPLVVMMIE ARDLVNDKGK PLLYVPGDSA RTRFHLYEIL SDEKLSALGR SLVEMVLHKG 360
  361 RKPRISLTRD TEHPLWPLYL VAKQLVQASQ PTEESLMPIV SRLDAEDRCP LEALIIRRLL 420
  421 IQAANFTGQE TVEPEPQPQP MPVDDGGLGC LGVIKIIFYI FIFAGLIGKI LHLFG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle