YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75236593
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTPIMKAF WRNAALLAVS LLPFSSANAL ALQAKQYGDF DRYVLALSWQ TGFCQSQHDR  60
   61 NRNERDECRL QTETTNKADF LTVHGLWPGL PKSVAARGVD ERRWMRFGCA TRPIPNLPEA 120
  121 RASRMCSSPE TGLSLETAAK LSEVMPGAGG RSCLERYEYA KHGACFGFDP DAYFGTMVRL 180
  181 NQEIKESEAG KFLADNYGKT VSRRDFDAAF AKSWGKENVK AVKLTCQGNP AYLTEIQISI 240
  241 KADAINAPLS ANSFLPQPHP GNCGKTFVID KVGY

Type	Start	End	Confidence
Signal Peptide	1	29	0.99
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	274	0.99