YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75236227
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMVALLVIAP LSAATAADQT NPYKLMDEAA QKTFDRLKNE QPQIRANPDY LRTIVDQELL  60
   61 PYVQVKYAGA LVLGQYYKSA TPAQRDAYFA AFREYLKQAY GQALAMYHGQ TYQIAPEQPL 120
  121 GDKTIVPIRV TIIDPNGRPP VRLDFQWRKN SQTGNWQAYD MIAEGVSMIT TKQNEWGTLL 180
  181 RTKGIDGLTA QLKSISQQKI TLEEKK

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	206	0.99