YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75236106
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLICLSSAL WAAPATVNVE VLQDKLDHPW ALAFLPDNHG MLITLRGGEL RHWQAGKGLS  60
   61 APLSGVPDVW AHGQGGLLDV VLAPDFAQSR RIWLSYSEVG DDGKAGTAVG YGRLSDDLSK 120
  121 VTDFRTVFRQ MPKLSTGNHF GGRLVFDGKG YLFIALGENN QRPTAQDLDK LQGKLVRLTD 180
  181 QGEIPDDNPF IKESGVRAEI WSYGIRNPQG MAMNPWSNAL WLNEHGPRGG DEINIPQKGK 240
  241 NYGWPLATWG INYSGFKIPE AKGEIVAGTE QPVFYWKDSP AVSGMAFYNS DKFPQWQQKL 300
  301 FIGALKDKDV IVMSVNGDKV TEDGRILTDR GQRIRDVRTG PDGYLYVLTD ESSGELLKVS 360
  361 PRN

Type	Start	End	Confidence
Signal Peptide	1	19	0.88
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	363	0.99