YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85697575, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNADNGLENA SMRAFRWTGV LTFALAIASS GIALINAPAT AVAQTAEKTM TTASGLQITD  60
   61 TKVGDGPSPQ PGQVCIMHYT GWLYENGQKG AKFDSSVDRN EPFEFPIGKR RVIAGWDEGV 120
  121 ATMKVGGKRT LIIPPELGYG ARGAGGVIPP NATLIFDVEL LGLKG

Type	Start	End	Confidence
Cytoplasmic	1	16	0.53
Transmembrane Helix	17	39	0.64
Non-Cytoplasmic	40	165	0.82