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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85714371, gi|...
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.19
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNANMRNFAL WVIIVLLLLA LFTLFQNPGH HTTAQDISFS QLLAETDQNN VRDVVIQGQE  60
   61 IRGTFTNGST FQTYAPSDPG LVKKLYDAKV QITAKPPGDS VPWFVSLLVS WLPFIALIGV 120
  121 WIFLSRQMQG GAGKAMGFGK SRAKMLTEAH GRVTFEDVAG VDEAKQDLQE IVEFLRDPGK 180
  181 FQRLGGRIPR GVLLVGPPGT GKTLIARAVA GEANVPFFTI SGSDFVEMFV GVGASRVRDM 240
  241 FEQAKKNAPC IIFIDEIDAV GRHRGAGLGG GNDEREQTLN QLLVEMDGFE ANEGVILIAA 300
  301 TNRPDVLDPA LLRPGRFDRQ VVVPNPDVVG REQILKVHVR KVPLAPDVNL KVIARGTPGF 360
  361 SGADLMNLVN EAALTAARRN KRMVTQAEFE EAKDKVMMGA ERKSLVMTEE EKLLTAYHEG 420
  421 GHAIVGLNVV ATDPIHKATI IPRGRALGMV MQLPERDKLS MSLEQMTSRL AIMMGGRVAE 480
  481 EMIFGHEKVT SGAASDIDQA TRLARMMVTR WGLSKELGTV SYGENNDEVF LGMQVNRQQN 540
  541 VSEATAQKID SEVRRLVETG YKDATRILTE KRADLETLAK GLLEFETLTG DEITDLLNGK 600
  601 KPNRESVLEP AAPRTSAVPP AGKTRPRPEP DPGLEPQPQA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle