YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91700813, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTLTKRVFL SLCLGTMLSS IAVVATAADV FPERSVRIVV PYTPGGFNDT LARVVGERLS  60
   61 KMWNQPVVVD NRPGGNTTIG NTFVAKSPPD GYTVLITPLP FSALPGLYGP QLPYDALKDF 120
  121 SPLVWAGSTQ NVLTVRNDLP VNSVKELLDY AKKNPGKLNY GSTGSGSSNH LSMELLMRMT 180
  181 DTKMTHIPYK GSAPAVLAIM GGETDVFFDN IPNVLPHLKA GKMKAIAVTG TQRSVLFPSL 240
  241 PTIAEAGVPG YEVNVWFGMQ LPAGTPKPLV DSMNRDIVRV LKEPEIIKRF REQGVEVVAS 300
  301 SPAAFGQLVQ GEVLKWTQVI RDANIKVE

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	328	0.99