YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85699407, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLDIARLLL FPALMAFAAA SDLLTMTISN RVSLLLIAGF LLLAPLSGMG LHEMLSHAGA  60
   61 GLAVLVVAFS CFAMGWIGGG DAKVAAASAL WFGFGHTLEY LVYASLFGGA LTLLLLQFRQ 120
  121 WPLPASLYSQ DWLLRLHGRN AGIPYGIALA FAALLIYPET DWVSAVDLTR FGFR

Type	Start	End	Confidence
Cytoplasmic	1	7	0.73
Transmembrane Helix	8	26	0.87
Non-Cytoplasmic	27	31	0.68
Transmembrane Helix	32	51	0.90
Cytoplasmic	52	58	0.68
Transmembrane Helix	59	79	0.93
Non-Cytoplasmic	80	99	0.74
Transmembrane Helix	100	118	0.94
Cytoplasmic	119	135	0.81
Transmembrane Helix	136	158	0.83
Non-Cytoplasmic	159	174	0.82