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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|190902791, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRHLNTSYR LVWNHITGTL VVASELARSR GKRAGVAVAL SLAAVTSVPA LAADKVVQAG  60
   61 ETVNDGTLTN HDNQIVLGTA NGMTISTGLE YGPDNEANTG GQWIQNGGIA NNTTVTGGGL 120
  121 QRVNAGGSVS DTVISAGGGQ SLQGQAVNTT LNGGEQWVHE GGIATGTVIN EKGWQAIKSG 180
  181 AVATDTVVNT GAEGGPDAEN GDTGQTVYGD AVRTTINKNG RQIVAAEGTA NTTVVYAGGD 240
  241 QTVHGHALDT TLNGGYQYVH NGGTASGTVV NSDGWQIVKN GGVAGNTTVN QKGRLQVDAG 300
  301 GTATNVTLKQ GGALVTSTAA TVTGINRLGA FSVVEGKADN VVLENGGRLD VLTGHTATNT 360
  361 RVDDGGTLDV RNGGTATTVS MGNGGVLLAD SGAAVSGTRS DGKAFSIGGG QADALMLEKG 420
  421 SSFTLNAGDT ATDTTVNGGL FTARGGTLAG TTTLNNGAIL TLSGKTVNND TLTIREGDAL 480
  481 LQGGSLTGNG SVEKSGSGTL TVSNTTLTQK AVNLNEGTLT LNDSTVTTDV IAQRGTALKL 540
  541 TGSTVLNGAI DPTNVTLASG ATWNIPDNAT VQSVVDDLSH AGQIHFTSTR TGKFVPATLK 600
  601 VKNLNGQNGT ISLRVRPDMA QNNADRLVID GGRATGKTIL NLVNAGNSAS GLATSGKGIQ 660
  661 VVEAINGATT EEGAFIQGNK LQAGAFNYSL NRDSDESWYL RSENAYRAEV PLYASMLTQA 720
  721 MDYDRILAGS RSHQTGVSGE NNSVRLSIQG GHLGHDNNGG IARGATPESS GSYGFVRLEG 780
  781 DLLRTEVAGM SVTAGVYGAA GHSSVDVKDD DGSRAGTVRD DAGSLGGYLN LIHNASGLWA 840
  841 DIVAQGTRHS MKASSDNNDF RVRGWGWLGS LETGLPFSIT DNLMLEPQLQ YTWQGLSLDD 900
  901 GQDNASYVKF GHGSAQHVRA GFRLGSHHDM NFGKGTSSRD TLRGSAKHSV RELPVNWWVQ 960
  961 PSVIRTFSSR GDMSMGTAAA GSNMTFSPSQ NGTSLDLQAG LEARVRENIT LGVQAGYVHS1020
 1021 VSGSSAEGYN GQATLNVTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle