YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85693905, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKAQSVKPN KRASGLQYLW VTVAIFIIDQ LTKWWVASDF ELYESRIIID GLFNLTYVHN  60
   61 YGAAFSFLSD GGGWQRWFFT LIAVAVSVVL LIWLRRNDVS FWRQNLSFSL ILAGAIGNVT 120
  121 DRFLFGYVID FLDVHYQGWH WPAFNVADCA ITLGAILMLL EAFIDNRRDP EETQGKE

Type	Start	End	Confidence
Cytoplasmic	1	15	0.89
Transmembrane Helix	16	34	0.90
Non-Cytoplasmic	35	73	0.92
Transmembrane Helix	74	94	0.93
Cytoplasmic	95	105	0.79
Transmembrane Helix	106	125	0.90
Non-Cytoplasmic	126	140	0.85
Transmembrane Helix	141	160	0.92
Cytoplasmic	161	177	0.88