YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75229238
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLTERTFT PSESLSSLSL FLSLARGQCR PGKFWHRRSF RQKFLLRSLI MPRLSVEWMN  60
   61 ELSHWPNLNV LLTRQPRLPV RLHRPYLAAN LSRKQLLEAL RYHYALLRGC MSAEEFSLYL 120
  121 NTPGLQLAKL EGKNGEQFTL ELTMMISMDK EGDSTILFRN SEGIPLAEIT FTLCEYQGKR 180
  181 TMFIGGLQGA KWEIPHQEIQ NATKACHGLF PKRLVMEAAC LFALRLQVEQ IIAVSNETHI 240
  241 YRSLRYRDKE GKIHADYNAF WESVGGVCDA ERHYRLPAQI ARKEIAEIAS KKRAEYRRRY 300
  301 EMLDAIQPQM ATMFRG

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	316	0.99