YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75228187, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASLKNQQG FSLPEVMLAM VLMVMIVTAL SGFQRTLMNS LASRNQYQQL WQHGWQQTQL  60
   61 RAISPPANWQ VNRMQTSQAG CVSISVTLVS PGGREGEMTR LHCPNRQ

Type	Start	End	Confidence
Cytoplasmic	1	10	0.55
Transmembrane Helix	11	33	0.76
Non-Cytoplasmic	34	107	0.62