YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85710757, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNTCPAVI CIYGPTAAGK TALSIELAKQ LDGEIISVDS ALIYRGMDIG TAKPSLAERQ  60
   61 GIPHHLLDIC DPAETYSASE FQRDATSLIE KILARGHTPI LVGGTMLYFK ALLEGMSALP 120
  121 ESDTNVRQQL QFELDTHGLA TLHQRLAEVD PEAAARIHPN DPQRTLRALE VYQLSAKPMT 180
  181 QLVQQRRGAL NYPIYQFAVA PQQRALLHER IAQRFDQMLA EGFQQEVEAL FKRNDLHPDL 240
  241 PAIRSVGYRQ MWHYLTGELT YQAMKERGII ATRQLAKRQL TWLRGWPDVH WLDTFAHDKL 300
  301 DQVRSRLQQP TEKFSVKD

Type	Start	End	Confidence
Signal Peptide	1	18	0.74
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	318	0.99