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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85689814, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKNESVIEG TAIDPVCGMS VAIDGAQHIA THDGAKHYFC SPRCHDKFVT DPELYLSGAH  60
   61 LDAVEDVPEG TIYTCPMHPE IRQPGPGSCP ICGMALEPET VSLGDGPDPE LVDMRRRFWW 120
  121 SALLTLPLFV YAMSDMAPGL SFDGLIEPAW AQWAQFALAT PVVLWGAWPF FVRAIQSLKT 180
  181 RNLNMFTLIG FGVAIAYLFS VVATVAPDLF PAAFRDHSGR VGVYFEAAAV ITTLVLLGQV 240
  241 LELKARGSTS SALRALLELA PPSAVKIFGS GDEREVPLDQ LATGDRLRVR PGDKVPVDGE 300
  301 IEEGSSAIDE SMISGEPLPV AKQAGDTVIG GTVNQTGGFI MRATGVGKDT MLSKIVQMVA 360
  361 EAQRSRAPIQ RLADQVAGWF VPAVVVIAIA TFVVWGIWGP APALAYALVN AIAVLIIACP 420
  421 CALGLATPMS IMTGTGKGAQ HGILIRNAEA LETLEKIDTL VVDKTGTLTM GKPDLVAVTP 480
  481 AEGIDEADFL AAVAGVEMGS EHPLAHAIVE GARTRGVSPA NATDLASTTG EGVEANVQGR 540
  541 RVAIGNEKMM RRVGIDDEAW LGTAESGRRQ GQTVMFVAFD GRPAGLIAVA DPIKPTSAAV 600
  601 IAALHKRDIR VVMLTGDSRG TAEAVAREMG IDEVHANVSP EDKHRKIEEL KAQGRRVGMA 660
  661 GDGINDAPAL AAADVGIAMG TGTDVAIESA GVTLVRGDLT GVVQAIVLSR GTMRNIRQNL 720
  721 FFAFAYNTLG IPVAAGVLYP FFGVLLSPMI AAAAMSLSSV SVIGNALRLR GLRLEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle