YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85668073, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLVTGGAG FIGSAVVRHA VARGYEVVNL DALTYAACLD NVASVAQSPR YSFVHADIRD  60
   61 RAALDRVFAE HAPEAVLHLA AESHVDRSID GPGAFVETNI TGTYNLLEAA RGHWQALGKP 120
  121 DSFRFQHIST DEVYGSLPAD PSVKFTENTP YDPRSPYSAS KAASDHLVRA WHETYGLPVL 180
  181 ITNCSNNYGP FHFPEKLIPV IILKALAGKP LPIYGDGRHV RDWLYVEDHA EALLKVLEQG 240
  241 VPGRSYNIGG ENERSNLDLV RTLCTILDAL CTRSDGASYA EQITFVTDRP GHDARYAIDP 300
  301 SRIRDELGWR PSVTVEEGLR RTVAWYLENE SWWRALEARE GVGKRLGTG

Type	Start	End	Confidence
Signal Peptide	1	22	0.89
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	349	0.99