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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75214449
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SMESNNGEAK IQKVKNWSPV WIFPIVTALI GAWVLFYHYS HQGPEVTLIT ANAEGIEGGK  60
   61 TTIKSRSVDV GVVESATLAD DLTHVEIKAR LNSGMEKLLH KDTVFWVVKP QIGREGISGL 120
  121 GTLLSGVYIE LQPGAKGSKM DKYDLLDSPP LAPPDAKGIR VILDSKKAGQ LSPGDPVLFR 180
  181 GYRVGSVETS TFDTQKRNIS YQLFINAPYD RLVTNNVRFW KDSGIAVDLT SAGMRVEMGS 240
  241 LTTLLSGGVS FDVPEGLDLG QPVAPKTAFV LYDDQKSIQD SLYTDHIDYL MFFKDSVRGL 300
  301 QPGAPVEFRG IRLGTVSKVP FFAPNMRQTF NDDYRIPVLI RIEPERLKMQ LGENADVVEH 360
  361 LGELLKRGLR GSLKTGNLVT GALYVDLDFY PNTPAITGIR EFNGYQIIPT VSGGLAQIQQ 420
  421 RLMEALDKIN KLPLNPMIEQ ATSTLSESQR TMKNLQTTLD SMNKILASQS MQQLPTDMQS 480
  481 TLRELNRSMQ GFQPGSAAYN KMVADMQRLD QVLRELQPVL KTLNEKSNAL VFEAKDKKDP 540
  541 EPKRAKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle