YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75197264, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINRQQGFTL LEVMAALAIF SMLSVLAFMI FSQASELHQR SQKEIQQFNQ LQRTITILDN  60
   61 DLLQLVARRN RSTDKIMVLG EEAIFTTQSR DPLAPLSEAQ TLLTVHWYLR NHTLYRAVRT 120
  121 SVDSRKDQPA QAMLEHVESF LLESNSGESQ ELPLSVTLHL QTQQYGGLQR RFALPEQLAR 180
  181 EESPAQTQAG NNNHE

Type	Start	End	Confidence
Cytoplasmic	1	7	0.79
Transmembrane Helix	8	31	0.78
Non-Cytoplasmic	32	195	0.93