YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75176967
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLEETVLAI RLHKLAVALG VFIVSAPAFS HGHHSHGKPL TEVEQKAANG VFDDANVQNR  60
   61 TLSDWDGVWQ SVYPLLQSGK LDPVFQKKAD ADKTKTFAEI KDYYHKGYAT DIEMIGIEDG 120
  121 IVEFHRNNET TSCKYDYDGY KILTYKSGKK GVRYLFECKD PESKAPKYIQ FSDHIIAPRK 180
  181 SSHFHIFMGN DSQQSLLNEM ENWPTYYPYQ LSSEEVVEEM MSH

Type	Start	End	Confidence
Signal Peptide	1	30	0.93
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	223	0.99