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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157157255, gi...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIKQHNGNT KADRLAELKI RSPSIQLIKF GAIGLNAIIF SPLLIAADTG SQYGTNITIN  60
   61 EGDRITGDTA DPSGNLYGVM TPAGNTPGNI NLGNDVTVNV NDASGYAKGI IIQGKNSSLT 120
  121 ANRLTVDVVG QTSAIGINLI GDYTHADLGT GSTIKSNDDG IIIGHSSTLT ATQFTIENSN 180
  181 GIGLTINDYG TSVDLGSGSK ITTDGSTGVY IGGLNGNNAN GAARFTATDL TIDVQGYSAM 240
  241 GINVQKNSVV DLGTNSSIKT NGDNAHGLWS FGQVSANALT VDVTGAAANG VEVRGGTTTI 300
  301 GADSHISSAQ GGGLVTSGSD ATINFSGTAA QRNSIFSGGS YGASAQTATA VVNMQNTDIT 360
  361 VDRNGSLALG LWALSGGRIT GDSLAITGAA GARGIYAMTN SQIDLTSDLV IDMSTPDQMA 420
  421 IATQHDDGYA ASRINASGRM LINGSVLSKG GLINLDMHPG SVWTGSSLSD NVNGGKLDVA 480
  481 MNNSVWNVTS NSNLDTLALS HSTVDFASHG STAGTFATLN VENLSGNSTF IMRADVVGEG 540
  541 NGVNNKGDLL NISGSSAGNH VLAIRNQGSE ATTGNEVLTV VKTTDGAASF SASSQVELGG 600
  601 YLYDVRKNAT NWELYASGTV PEPTPNPEPT PAPAQPPIVN PDPTPEPDPT PNPTPTPKPT 660
  661 TTADAGGNYL NVGYLLNYVE NRTLMQRMGD LRNQSKDGNI WLRSYGGSLD SFASGKLSGF 720
  721 DMGYSGIQFG GDKRLSDVMP LYVGLYIGST HASPDYSGGD GTARSDYMGM YASYMAHNGF 780
  781 YSDLVVKASR QKNSFHVLDS QNNGVNANGT ANGLSISLEA GQRFNLTPTG YGFYIEPQTQ 840
  841 LTYSHQNEMA MKASNGLNIH LNHYESLLGR ASMILGYDIT AGNSQLNMYV KTGAIREFSG 900
  901 DTDYLLNNSR EKYSFKGNGW NNGVGVSAQY NKQHTFYLEA DYTQSNLFDQ KQVNGGYRFS 960
  961 F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle