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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157155919, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGRLLDTVP LSSLTGVGAA LSNKLAKINL HTVQDLLLHL PLRYEDRTHL YPIGELLPGV  60
   61 YATVEGEVLN CNISFGGRRM MTCQISDGSG ILTMRFFNFS AAMKNSLATG RRVLAYGEAK 120
  121 RGKYGAEMIH PEYRVQGDLS TPELQETLTP VYPTTEGVKQ ATLRKLTDQA LDLLDTCAIE 180
  181 ELLPPELSQG MMTLPEALRT LHRPPPTLQL SDLETGQHPA QRRLILEELL AHNLSMLALR 240
  241 AGAQRFHAQP LSANDALKNK LLAALPFKPT GAQARVVAEI ERDMALDVPM MRLVQGDVGS 300
  301 GKTLVAALAA LRAIAHGKQV ALMAPTELLA EQHANNFRNW FEPLGIEVGW LAGKQKGKAR 360
  361 LSQQEAIASG QVQMIVGTHA IFQEQVQFNG LALVIIDEQH RFGVHQRLAL WEKGQQQGFH 420
  421 PHQLIMTATP IPRTLAMTAY ADLDTSVIDE LPPGRTPVTT VAIPDTRRTD IIDRVRHACI 480
  481 TEGRQAYWVC TLIEESELLE AQAAEATWEE LKLALPELNV GLVHGRMKPA EKQAVMASFK 540
  541 QGELHLLVAT TVIEVGVDVP NASLMIIENP ERLGLAQLHQ LRGRVGRGAV ASHCVLLYKT 600
  601 PLSKTAQIRL QVLRDSNDGF VIAQKDLEIR GPGELLGTRQ TGNAEFKVAD LLRDQAMIPE 660
  661 VQRLARHIHE RYPQQAKALI ERWMPETERY SNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle