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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75178246
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSFIGGLVV FVSAAFNAQA ETWFDPAFFK DDPSMVADLS RFEKGQKITP GVYRVDIVLN  60
   61 QTIVDTRNVN FVEITPEKGI AACLTTESLD AMGVNTDAFP AFKQLDKQAC VPLAEIIPDA 120
  121 SVTFNVNKLR LEISVPQIAI KSNARGYVPP ERWDEGINAL LLGYSFSGAN SIHSSADSDS 180
  181 GDSYFLNLNS GVNLGPWRLR NNSTWSRSSG QTAEWKNLSS YLQRAVIPLK GELTVGDDYT 240
  241 AGDFFDSVSF RGVQLASDDN MLPDSLKGFA PVVRGIAKSN AQITIKQNGY TIYQTYVSPG 300
  301 AFEISDLYST SSSGDLLVEI KEADGSVNSY SVPFSSVPLL QRQGRIKYAV TLAKYRTNSN 360
  361 EQQESKFAQA TLQWGGPWGT TWYGGGQYAE YYRAAMFGLG FNLGDFGAIS FDATQAKSTL 420
  421 ADQSEHKGQS YRFLYAKTLN QLGTNFQLMG YRYSTSGFYT LSDTMYKHMD GYEFNDGDDE 480
  481 DTPMWSRYYN LFYTKRGKLQ VNISQQLGDY GSFYLSGSQQ TYWHTDQQDR LLQFGYNTQI 540
  541 KDLSLGVSWN YSKSRGQPDA DQVFALNFSL PLNLLLPRSN DSYTRKKNYA WMTSNTSIDN 600
  601 EGHITQNLGL TETLLDDGNL SYSVQQGYNS EGKTANGSAS MDYKGAFADA RVGYNYSDNG 660
  661 SQQQLNYALS GSLVAHSQGI TLGQSLGETN VLIAAPSAEN TRVANSTGLK TDWRGYTVVP 720
  721 YATSYRENRI ALDAASLKRN VDLENAVVNV VPTKGALVLA EFNAHAGARV LMKTSKQGIP 780
  781 LRFGAIATLD GIQTNSGIID DDGSLYMSGL PAQGAITVRW GEAPDQICHI SYQLTEQQIN 840
  841 SAITRMDAIC R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle