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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75176504, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSKTAQPK HSLRKIAVVV ATAVSGMSVY AQAAVEPKED TITVTAAPAP QESPWGPAAT  60
   61 IAAKHSATAT KTDTPIEKTP QSISVVTNEE MQMHQFQSVK EALGYTPGVT VSSRGASNTY 120
  121 DFVIIRGFSS VGLNQNNYLD GLKLQGNFYN DAVIDPYMLE RVELMRGPTS VLYGKSNPGG 180
  181 IISMVSKRPT TEPLKEIQFK MGTDNLFQTG FDFSDALDDN GEFSYRLTGL ARSTNEQQKN 240
  241 SESQRYTIAP SFSWRPDDKT NFTFLSYFQN EPETGYYGWL PKEGTVEPLP NGKRLPTDFN 300
  301 EGASNNTYSR NQKMVGYSFE HGFNDTFTVR QNLRFSEMKT SQKSVYGTGI AGDGHTLNRG 360
  361 TVVDNERLQN FSVDTQLESK FATGDVEHTL LTGVDFMRMR NDINASFGSA PSIDLYNKYH 420
  421 PEYFAFGSAE PYQMNESKQT GIYVQDQAEW NKWVFTLGGR YDWSKQATTV RENSYTPTEG 480
  481 YIERNDHQFT WRGGVNYLFD NGISPYFSYS QSFEPSAFDL WSNPRISYKP SKGEQYEAGV 540
  541 KYVPNDMPVV VTGAVYQLTK TNNLTADPTN PLAQVPAGEI RARGVELEAK AALNANINLT 600
  601 ASYTYTDAEY TKDTNLKGKT PEQVPEHMAS LWGDYTFNEG PLSGLTLGTG GRFIGSSYGD 660
  661 PANTFKVGSA AVMDAVVKYD LARFGMAGSS LAVNVNNLLD REYVASCFQT YGCFWGAERQ 720
  721 VVATATFRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle