YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75175020
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGVLTPEEV MNKAEYKAMR QAFDSLPLAK QGEAVRQIVA AWSLAYQDFP VNLKKEMGRV  60
   61 TERIVDAINL ALILNQTESR LSESQKNVDV ANQIISDTVK AINDVNKKIA EKRNQQVSLT 120
  121 DLMNKKQKEV EDLKKIFKNH SYHRIRDAQR EYDDARNKYA LLASDINALQ AQVSGLTARK 180
  181 QQAEQNKAAA EKAKADAAAK AAAEKAAAEA KAKAEAEKAR KEAEEKANDE KAVLTKASEI 240
  241 IISVGDKAGE YLGDKYKVLS REIADNIKNF QGKTIRSYDE AMASVNKLMA NPDLKINAAD 300
  301 RDAIVNAWKA FDAEDMGNKF AALGKTFKAA DYVMKANNVR EKSIEGYQTG NWGPLMLEIE 360
  361 SWVLSGIASA VALSFFSAIF GTFAMLGVFS TSLAGILAVI LAGLVGALID DNFVDKLNNE 420
  421 IIRPAY

Type	Start	End	Confidence
Cytoplasmic	1	361	0.71
Transmembrane Helix	362	384	0.87
Non-Cytoplasmic	385	387	0.48
Transmembrane Helix	388	409	0.86
Cytoplasmic	410	426	0.63