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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|72602687, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRCLAQQW FMRFLAKLRL MPKPTPLKAS PRSLSGLLPF LMPYRGRIGL ALAFLVLAAT  60
   61 ATLAFPLALR SLIDAGLVQS DKGAQMMALR QHFVALFAVA VALGLFSAAR FYMVSWLGER 120
  121 VTADLRNAVY THVLQQSPEF FETTQTGEVL SRLSADTTLV QTVVGSSLSM GLRNTVMGIG 180
  181 ALGMLIWTNP YVMLQVLTLL VLVIVPSLWF GRRVRKLSRA SQDRVADSSA IAAEVLNAIP 240
  241 VVQSYTAEER ESARFNASTD SAFETAVKRT RARSVLVAFI IIATSAALLW GLYQGTQAVI 300
  301 AGRISAGDLG QTVLYVIILA SAFAILGEVY GDLLRAAGAT ERLMELLKSQ SPITSPSNPA 360
  361 LAPVQLDGSA IKFEDIRFNY PSRPTQAALT DFSLEVKPGQ TVALVGPSGA GKSTVFQLLL 420
  421 RFYDPGAGQI VLDGVATRDL SLHDLRQRIG IVPQDAVIFS SSALENIRYG RPEASDAEVK 480
  481 AAAQAAFADE FINALPQGYD TFLGERGVRI SGGQRQRIAI ARAMLKNPPL LLLDEATSAL 540
  541 DAESERMVQA ALESAMRGRT TLVIAHRLAT VIKADHIVVL DHGRLVEQGT HAELVAYGGV 600
  601 YAGLAALQFN A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle