YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74024549, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNREKDYKMN DDEIVIPRRH TFEEWVAAFG MFLMLVLVCV EITKREFFNS SFLWSEEVAR  60
   61 YLMIWSIYFG ASAAVASGSH LRIDMLIDMV SSRVRRLLDI FAQFWVCAFS LAITYAGYHY 120
  121 VEDSFTQGFV SADSNLPLQM GWIQLVIPVT FALSAFHALR QLSKLVATDR ASPKEI

Type	Start	End	Confidence
Cytoplasmic	1	20	0.99
Transmembrane Helix	21	43	0.87
Non-Cytoplasmic	44	60	0.91
Transmembrane Helix	61	81	0.93
Cytoplasmic	82	99	0.87
Transmembrane Helix	100	119	0.95
Non-Cytoplasmic	120	139	0.91
Transmembrane Helix	140	159	0.94
Cytoplasmic	160	176	0.94