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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89901008, gi|...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIFASMKIG KRLGFGFAVV LAFAVLITGI GVWQLNALGN ATREMTREPL AKERLISDWS  60
   61 RNINVAVIRT TAVAKSSDPS LVPFFSTNAA EITKSTSALL KQIEPLLSSQ EEKDLFSKVS 120
  121 DVRKAYLSSR DQVTKLKADG QADEANRLLE STYIPAADNY MKLVSEFLGL QRKNLDAKAV 180
  181 EISGIETTSR NYLVALAALV LTFGVICAWL LTVGITGPLT NAVAVARRVA DGDLATDIQT 240
  241 EGKDETAQLL QALSAMKDNL ARIVGNVRQG SEGVATASAE IAQGNNDLSA RTEQQASALE 300
  301 ETAASMEELS ATVRQNADNA RQANQLAQSA STVAIKGGEV VSRVVETMKG INDSSKKISD 360
  361 IIQVIDGIAF QTNILALNAA VEAARAGEQG RGFAVVASEV RSLAGRSADA AKEIKGLIND 420
  421 SVQRVEQGST LVDQAGVTMT EVVSSIRRVT DIMGEISAAS TEQSQGVAQV SEAVTQMDQV 480
  481 TQQNAALVEE MAAAASSLKS QAQELVGTVS VFKLSQSQGA GLPDSSAPQR TRSVRSAPAP 540
  541 APAPAARKLG NTPAKPAIRA KPDSLAAPAA ATPKAGGDDW ESF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle