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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85666505
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFPGPNQPP SNGGGNKPNG GSNPFTNPFS RNDDGKNGGS GANGNKSNGP RPFWQSPWLW  60
   61 VVVVALLAVT MFQLFAGAGS QTIDTKDGMQ ILNGNTVEYA TIVDNTQQVK LKLSSDYSAT 120
  121 DPDTGRTKNY GKNVQFYYTY AQSAAVVKAV QKADPAKGWT ASMQQTSIWT YLLTSLLPFL 180
  181 IIFGLFWFLM SRMGGAAGGM FGMGGKKNSG KLLDGQTPTT KFSDVAGEDA AVQEVEEIKD 240
  241 FLKDPSRYKA LGARIPRGVL LYGPPGTGKT LLARAIAGEA GVPFYSMAGS DFVEMFVGLG 300
  301 ASRVRDLFDE AKKNAPAIIF IDEIDAVGRK RGGSGMSGGH DEREQTLNQL LVEMDGFGND 360
  361 TNLIIIAATN RPDVLDPALL RPGRFDRQVA VEAPDLEGRE AILKVHAKGK PFVPDVDLHM 420
  421 IAVRTPGFTG ADLANVLNEA ALLCARAGAQ LIDNRAIDEA IDRVQAGPKR RSKGMALDEL 480
  481 RNTAYHEGGH ALVAAAMNDT DPVTKVTILP RGRALGYTAV MPTEDRYSMS RNQLLDQMAY 540
  541 AMGGRTAEEV VFHDPTTGAS NDIEKATNIA RQMVLDYGFS EKLGAIKWSD DEQSDLGALT 600
  601 HKYSAHTAEI IDEEVLKLVE TAHTEAWNVI NENRDILDEL VRQLLVKETL NEKELAAIFA 660
  661 NIKKAPKREV WLSDEKRPDS DIPPVPIPDK LKKSAGLTN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle