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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67782074, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNQWFSKIA IWLVIAMVLF TVFKQFDTRG GAGSNYLGYS EFLEEVRSKR IKTATIAEGQ  60
   61 GGTEISATTT DDRKVRTTAT YLDRGLVGDL IANDVKFDVK PREEGSLLMT LLVSWGPMLL 120
  121 LIGVWVYFMR QMQGGGKGGA FSFGKSKARM LDESTNPVTF ADVAGCDEAK EEVKEVVDFL 180
  181 KDPQKFQKLG GRIPRGLLLV GPPGTGKTLL AKGIAGEAKV PFFSISGSDF VEMFVGVGAA 240
  241 RVRDMFENAK KNAPCIIFID EIDAVGRQRG AGLGGGNDER EQTLNQMLVE MDGFETNVGV 300
  301 IVVAATNRPD ILDAALLRPG RFDRQVYVTL PDIRGREQIL NVHMRKVPLG QDVNASVIAR 360
  361 GTPGMSGADL ANLCNEAALM AARRNARTVE MQDFEKAKDK ILMGPERKSM VMPEEERRNT 420
  421 AYHESGHALL GKLLPKCDPV HKVTIIPRGR ALGVTMSLPA QDRYSYDREY MLSQISMLFG 480
  481 GRIAEEVFMN QMTTGASNDF ERATALARDM VTRYGMTEAL GPMVYAENEG EVFLGRSVTK 540
  541 TNNMSEATLQ KVDGEVRRII DQQYAQARKL IEDNKDKIHA MAKALLEWET IDGEQLDDII 600
  601 AGKEPRPPKD WTPRNSSVGG GGGPSGGTPA VSTDPAPTVA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle