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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89902813, gi|...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGSEGNSGI PATVSARQSL KTKVTLITLL VFVLSLWSLS YYASRMLRQD MERLLGEQQF  60
   61 ATVSQVAAQL NQALQARVSA LETVARAISP ALLDKPQALQ VFLEQQIILK TLFNAGVHVL 120
  121 GPDGGVLGLV PEASRVGADY FQNPTVQAAL SEGKTSIGAP THEVLLKQPV FPVITLIRDA 180
  181 GGRVIGALAG VTNLDQPSFL DMISQSRYGK TGGYVLIAAQ QRRVLAATDK SRVMEVLPAP 240
  241 GGNPAIDRFL QGEEGSTVMR NPLGLEILAS DKSLPAAGWV LAAVLPTAEA FAPVRAMQQR 300
  301 MLLATSLLTL LAGLVVWWTI KRQLAPLLAT ARRLAAMADE KQALRALPVT HPDEIGQVVK 360
  361 GFNRLLGTLG QREALLQQIL DTSSVAIFLV DRQGRITKAN QRMATLFGYP LHELQGMEYV 420
  421 ALVHPAQRET GRKNMLALLD SALQSVDLER LYWRADQTEF WGHLTGQRFV DGNGEEQGLV 480
  481 GVIADITQRR QTEAELRIAA IAFESEQGMA ITDPQGVMLR VNRAFSAITG YSAPEAVGQN 540
  541 PRLLSSGRHD AAFYAAMWDS LVREGAWQGE IWNRRKNGEV FPEWLTISAV KDPAGQATHY 600
  601 VATFTDLSTR KSAEDQIKSL AFYDTLTGLP NRRLLLDRLK QALASGARHR RQGALLYIDL 660
  661 DDFKTLNNTY GHDVGDQLLQ EVAQRLSHYL RAGDTVARPG GDSFVVLLEA LSTNSVEAAT 720
  721 EAENTGEKIR LALSQPYQIA DHAHRSTASI GVTLFDDRQQ EGIDEPLKRA ELAMYQAKTA 780
  781 GRNTLRFFDP QMQTAVMAMA ALEADLREAV RSNQFLLYYQ AQVSGERQVA GVEALVRWQH 840
  841 PVRGLVPPAE FIPLAEQTGL ILPLGQWVLE TACAQLAAWA SQPERAHLTV AVNVSALQFH 900
  901 QADFVAQVLA ALKRAGANPQ RLKLELTESL LVHDAEDVIA KMITLKEQGV GFSLDDFGTG 960
  961 YSSLSYLKRL PLNQLKIDQG FVRDILHDAN DAAIAKMVVA LADTLGLSVI AEGVETEAQR1020
 1021 DFLAAQGCHA YQGHLYSRAL PIDAFEAFMR QV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle