YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|72607515, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYHKAVLMV AALCAFASGA HAQETGTLKK IKDTGVIALG HRESSIPFSY YDQNQQVVGY  60
   61 SREFQMKVVD AVKKKLNLPN LQVKNIPVTS QNRIPLVQNG TVDIECGSTT NNTERQQQAA 120
  121 FSDTIFVIGT RLMTKKDSGV KDFADLKGKT VVTTAGTTSE RLLRKMNNDK QLGMNIISAK 180
  181 DHGDSFNTLE SGRAVAFMMD DALLAGERAK AKQPGEWVIV GTPQSEEAYG CMMRKGDTDF 240
  241 KKVVDDAISQ VEKSGEAAKI YAKWFESPIP PKGLNLNFPL SDSMKKLYAN PNDKALD

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	297	0.99