YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KAD_POLNA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLILLGAPG AGKGTQATFI CQKYGIPQIS TGDMLRAAVK AGTPLGIEAK KVMDSGGLVS  60
   61 DDLIINLVKE RIAQPDCAQG FLFDGFPRTI PQADAMKAAG VKIDYVLEID VPFEAIIERM 120
  121 SGRRSHSASG RTYHVKYNPP KVEGLDDVTG EPLIQREDDK EETVAKRLEV YSAQTRPLVA 180
  181 YYSDWATEAP DEAPKYRAIS GTGTVEEITE RAFKALSN

Type	Start	End	Confidence
Signal Peptide	1	17	0.72
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	218	0.99