YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Y1459_BURCM
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIAHDLQSI GAQEQALVFP HFDPARAWAL GNRMHALATA RGHAIAIDIV TFGQPLFYAA  60
   61 LAGATPDNAD WVRRKRNVVA HFRRSSYAIG LRMQQAGASL ADKHGLPISD YSPHGGSFPL 120
  121 TVAGAGVIGS ITASGLPQRA DHEFVVEALC AELGQDYAAL ALARS

Type	Start	End	Confidence
Cytoplasmic	1	41	0.65
Transmembrane Helix	42	62	0.57
Non-Cytoplasmic	63	115	0.89
Transmembrane Helix	116	136	0.61
Cytoplasmic	137	165	0.61