YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|72611379, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASRSTQTV RRALSRPPRP PFTDSHMSTP KHAKVLILGS GPAGYTAAVY AARANLSPVL  60
   61 VTGIAQGGQL MTTTDVENWP ADAKGVQGPE LMARFQEHAE RFNTEIVFDH IHTAKLHEQP 120
  121 IRLIGDSGEY TCDSLIIATG ASAQYLGLPS EEAFMGKGVS ACATCDGFFY RNQEVAVIGG 180
  181 GNTAVEEALY LTGIAKKVTV IHRRDKFRAE PILIDRLLEK EKEGVVDIKW DHVLDEVTGE 240
  241 ESGVTGLRIK NVKTGATQDL NVQGVFVAIG HKPNTDLFQG QLEMKDGYIL TKSGLHGNAT 300
  301 STSVPGVFAA GDVQDNVYRQ AITSAGTGCM AALDAQRYLE GLHDKK

Type	Start	End	Confidence
Signal Peptide	1	51	0.50
N-region	1	42
H-region	43	48
C-region	49	51
Cleavage Site	51	52
Non-Cytoplasmic	52	346	0.99