YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84709961, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHSSVFTNA SRRHFSFGAL ASAALLGSGL LAAVPAAAQA AYPSKTITII VPFAAGGTTD  60
   61 ILARIVGQAL TAELGQTVIV DNRAGAGGNI GGQAAARAAA DGYTLFMGTV GTHAINASLY 120
  121 KKMPFDPVKD FAPLTRVANV PNLLVANPAQ PFKTVKELIA YAKANPGKLN FGSSGNGSSI 180
  181 HLSGELFKSM AKVDMQHVPY KGSAPAMTDL LGNQVAIMFD NMPSAIQHVR SGKLRAIAVT 240
  241 TAKRSPELPD VPTIAEAGVP GYEATSWFGL FAPAATPPAV VTRLNTAIAK VLAKPEVKKQ 300
  301 INEQGAEVYS ETPAQFAAFI QKESAKWSKV VKESGASLD

Type	Start	End	Confidence
Signal Peptide	1	40	0.98
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	339	0.99