YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|121603685, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPITCAQAL AAARHAGLDR LDAQLLLLHA LGKPASARSW LLAHDTDALA QEVAEAFRAL  60
   61 SLRRASGEPL AYIVGGKEFF GLALQVDARV LVPRPDTETL VEWSLAVLKA PGLMPPLKVL 120
  121 DLGTGSGAIA LAIAHSLKAT GREAQVTAVD ASADALDVAR ENARRLGLAV AFIESSWLQG 180
  181 VNGRFHLIAS NPPYIASADP HLAALAHEPL QALTAGMDGL DDIRDIIQQA PDHLLPGGWL 240
  241 LLEHGYDQAG RVRELLVQRG FLQVQGRQDL AGIERCSGGQ WPP

Type	Start	End	Confidence
Signal Peptide	1	16	0.59
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	283	0.98