YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|72612523, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGSALRGND GRRTRVPRAF ALAAALWLAV PAAHADDGMI VIPGRGETAE TALAHANAAS  60
   61 GGQFGGNAGM AVGAASGAAS GTVPGAGTAS GVGIAPGAGM AMATGAGGTA AAAYAAQPAG 120
  121 SMVVTSVPPP AAVPAPAPRP VYAAARMNTA ARMNTGYGAP RAADPGAVAT VVAGTAESAS 180
  181 NPASNPARAA IAPRVAAARP LPAAPAPRAP TAATTAAQAS AAPQPATPPG QQDPDAIRRT 240
  241 ALAFLQQQIA GLPGKTTATV ATAFPRGLAA CTTLEPFLPT GARLWGRTTV GVRCAGERPW 300
  301 TVYLQAKVAV QATYYVAARQ IAPGEPLTVA DLVARDGDLT VLPLAVITDP AQAVGATALA 360
  361 RISAGLPLRQ DMLKSAASVS AGQTVRVVAA GPGFTISAEG SALANAAPGQ SIRVRMAAGQ 420
  421 IVTAIVKDAG TVEIPL

Type	Start	End	Confidence
Signal Peptide	1	35	0.99
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	436	0.98