YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84684394, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILVTGGAG FIGSAVVRLA ISRGQEVVNL DALTYAACLD NVASVADAPG YAFEQVDIRD  60
   61 RPALDRVLSD HRPDAIMHLA AESHVDRSID GPATFIETNV MGTFNLLEAA RSYWDGQGRD 120
  121 PAFRFHHIST DEVFGSLGPE GQFTEESPYD PRSPYSASKA SSDHLVRAWH ETYGLPVVLT 180
  181 NCSNNYGPYH FPEKLIPIVI LKALAGEPIP IYGDGSNVRD WLYVEDHADA LLLVLEEGAI 240
  241 GRSYNIGGEN ERSNLDLVRT LCTILDRMAP KEGSYGDQIT FVADRPGHDA RYAIDPTRIR 300
  301 DELGWRPSVT VEEGLEKTVR WYLDNRDWWQ ALLDRDGVGR RLGRAS

Type	Start	End	Confidence
Signal Peptide	1	19	0.77
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	346	0.99