YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84665632, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPAGGPNED KPRAKAQRDK MVGLEHYLGL AGALFVIGIF GLFLNRKNVI ILLMSIELML  60
   61 LSVNINLVAF SSYLGDMVGQ VFTLFVLTVA AAEAAIGLAI LVSFFRNRGT IAVEDVNVMK 120
  121 G

Type	Start	End	Confidence
Non-Cytoplasmic	1	22	0.51
Transmembrane Helix	23	44	0.89
Cytoplasmic	45	49	0.45
Transmembrane Helix	50	74	0.79
Non-Cytoplasmic	75	80	0.51
Transmembrane Helix	81	105	0.88
Cytoplasmic	106	121	0.59