YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125811279, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLQRDWNL QGSRGSIYCA SEPDPAGGVQ YESGGFILNT KPAAGSGVAL GSGGGEGGVG  60
   61 IECGSLFSIV SAPPAPLPTV PTVVVPLAEL DVKQMESLCM PSMSMSPSEL RSSRKTQQYG 120
  121 NGTGNGNGSQ TAKSKCIRKA KERDRIVQRR SKPLAKDRDS STTTTDSGGG NLEPPDGGYG 180
  181 WFIVFGAFSV QFWVAGLVKS YGVLYVEIME TFPSSTATVA SWIPAILSAL CLVLAPLSSA 240
  241 LCQRFSCRAV VFVGGIFCAM GMMLSYFATS LVHLLFTFGI LTGIGGGLST TPGIVIVSQY 300
  301 FDTHRALANG ICVSGTAAGS FILPVLIKHL VEKCGFHATL LILGGCMLHV CVSAMLYRPI 360
  361 SAYTDLGQAQ APEATEKPLN EDINPSTTGI LTTSTYLDTC EVVGDNELSD KFIEHLFLEE 420
  421 SKNHLNYYTS KQPAAARQDD KSAQESDDEV KDIIGETTFI KPMKKVRSSG LLHSVEDLST 480
  481 DSTWVYRKHS GTDSNRGSRR RRNVFANDEV ISKIQAHLER PLSPPSVVSR GLSKSMEIPT 540
  541 PVSNLSELKQ QQLSDSGGIL NSQLVESINA EGAADDEDDD DDDEEQLPRT CCERIEMYLD 600
  601 ISLLQEPRFI LMTLSVTLMS VGCPYMLYYL PAHVISIGYN KSEAGYLVAI SAVLDLCGRL 660
  661 GLGWLSDLQL FDRKKTYTLC ILGAGLAVLT IPFAKTLILV GLSAAVYGLC LGSWYVLMPV 720
  721 LLADVFGTDR ISSSYGLVRM FQSIGAISVP PLAGLLRDLS GDYEICFYCM GSCMVLGCTP 780
  781 LIVWSILEAR NHRLFVQGEE DCEDDCEDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle