YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84517165, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMELWQEII VAAFLVIAGV FGFVGSYGLI KLPDPMTRLH APTKTTTLGV GGVLIASMIY  60
   61 FLFSDAKFSF HELMITLFLF LTAPITAHFI AKANLHTSVK REDVSPTGSD RPWAGFESDE 120
  121 DRRIAEAKSD IDE

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.82
Transmembrane Helix	9	30	0.95
Cytoplasmic	31	42	0.80
Transmembrane Helix	43	63	0.91
Non-Cytoplasmic	64	69	0.76
Transmembrane Helix	70	91	0.90
Cytoplasmic	92	133	0.88