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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71838819, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTRFQRITI KRKIMLLTLV TCATIAFMIS LTLIVGQVMR YRQDILKNTA VVADMVSYSA  60
   61 TAPLMFADTQ GAGDALSPLS TNPNVLSAFI VTSEGAIFAA YQNPKAPAEN PHQRELGPAA 120
  121 TNAERLASLK QMGRSDIWHI PPCFDIVRPI LSDGQLLGYV VVHISSAPLW DMIISVASSS 180
  181 ALILLVALLA AYAIASRLQK LITGPITNLA QTMSRVTTNK DYSIRAANES CDEIGQMIDG 240
  241 FNEMLSQIEA QDRELLKSRD TLEDTVAIRT EELQRMVADL EVARDAANAA NRAKSEFLAN 300
  301 MSHEIRTPMN GVLGMTELLL GTLLNGKQRQ FAETIRNSGE ALLAIINDIL DFSKIEAGKI 360
  361 ELEKIPFDMH ELLCDAAELF ASSAHQKGLE LLVSIHPDVP RMVVGDPARL RQVVLNLASN 420
  421 AVKFTDQGEI VISADVAESG QDNILIRFLV RDTGIGISPE SLEKIFEGFA QADGSMTRRY 480
  481 GGTGLGLTIV RQLAGLMGGT TRVESTPDVG SCFSFTARFD LPATLQQAAL PSSAHEALRE 540
  541 QKVLVVDDNA TNRTILEQII LSWGMRIKTA SCALEALASL RNAGQSDPFQ LAILDMMMPA 600
  601 MDGIELAHAI RTDPSIPPLH MVMLTSSGII GEMERSQAAG IEYCLTKPVR SSWLYDCLIG 660
  661 LTGTALGRTS QRKEQEQVVA TGFTTVSDSS ALLVEDNLVN QDVGREMLRF LGYEVTVASN 720
  721 GSEALDLLAS RRFSIILMDC QMPVMDGYQT TKELRLREKS APGEGGGTPH QTVIALTAHA 780
  781 GEQDRELCME AGMDDYLTKP YTLEQLTGIL SRWTTSAASV AEERADTEPG SLPPLAALTK 840
  841 CPAPTLPEAT ERKAADNGES ALDLRYIDNI RKIDPEGKKQ VLRTVIGYYL EDAPRVIAAL 900
  901 RQAADNGDME QLYKHAHYFK SSSANLGASR LAELCKTVEF IGKNNSVLEG TGLLARIESE 960
  961 FAIVSHALTE VMQGGDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle