YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71838495, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRFLSMNQ WVVCGALAIV AGSTAPAVAD IYMHEDGNGV IHFTDAPVNR RSRVFIRHIE  60
   61 DDRKVRTTFR FSGYSRDPGL FETIIDSCAT EYGVDKALVK AVIRAESGYN PNAVSPKGAA 120
  121 GLMQLMPKTA QGLKVTNAFD PADNIRGGVR YLRFLLDTFN GDVRLALAAY NAGLAKVARY 180
  181 GGIPPYRETR DYVARVMDYR RAYGDD

Type	Start	End	Confidence
Signal Peptide	1	29	0.99
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	206	0.99