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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|118581402, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.33
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKTKAILL LVALIAGISS FLYLSSHLIL LKSFSQLEQD YTSENVRRAL NSIADDIRQI  60
   61 DTITSDYAGW DEAYAFIDNG NKTFSRSNLD DAIFPKLRLN ILVYVRNSGA IVFAKAFDLR 120
  121 TGTESPLPPS LVKQLTANSP LVRHTSSDSV LSGALLLPEG PLLLVSRPVL TSSYQGPIHG 180
  181 SLIMGRFLGT DEIRRLADLN HLNLSILPLN AARQSSKSAT ILPPLSATRP IAVIPGSGET 240
  241 ITGYGLINDI HGKPALIARV DMRRKIYSQG VDAVQYFLFC FLGFCLISSL TGYILYAKLL 300
  301 ASRKERKDTE KRYRSVISQA SDIILLVDID SRRILEANLA FQRLLNYAPD KATQLTLYDI 360
  361 MEDDRSGVDW RINRILSEKV CFLGEHTVRA EDGSMVEVDL NANLVSYGEQ QVICMVLRDI 420
  421 SERKRFEGEL MHMAHHDALT GLPNRTLFFD RLRQGLYKKE RSGKMLAVIY LDLDRFKIIN 480
  481 DTLGHHTGDM LLKEVADRLR GVVRKADTIS RLGGDEFTII IDEIATPADS LLVAEKILHV 540
  541 FSAPFRLEKH EMFITASMGV TLYPNDGDTA EKLLKNADTA MYHAKEEGRN TYQFFSEEMN 600
  601 SRVSERLSME TGLRHALARN EFLLHYQPRV NTTTGRIVGV EALIRWQQPQ KGLILPDAFI 660
  661 PLAEETGLII PIGEWVLRNT CTQARAWQEA GFAQMRISVN ISCRQFTHDN LPDTIRGILR 720
  721 ETGLQPSCLE LEITESVIML NPERAISLLN ELKEMGISIA IDDFGTGYSS LSLLKRLPAD 780
  781 ILKIDKSFVS GIPGNKSDET LVATIINLGH NMGLGLVAEG VERQEQLHFL EERNCQEVQG 840
  841 YYFSKPLPAE TLQPLLKNGT YPAAAGRQQP TDARDI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle